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姓名:许升全 |
职称/职务:教授 |
电话: |
传真: |
电子信箱:xushengquan@snnu.edu.cn |
研究方向:动物分类与进化 |
办公地点:格物楼 |
一、个人简介
教授,博士生导师。分别于1990、1993、2000年在陕西师范大学生物系、动物研究所、太阳集团城娱8722官网获得学士、硕士和博士学位;南开大学博士后。先后赴日本神户大学、美国密歇根大学进行合作研究。在中国科学·生命科学、Molecular phylogentics and evolution等国内外学术期刊上以第一作者或通讯作者发表论文120多篇。主持完成国家自然科学基金项目4项,20多项省级、横向课题。曾获陕西省科学技术进步奖二等奖(2003年,第二完成人);宁夏回族自治区科技进步奖二等奖(1998年,第五完成人)。2003年获周尧昆虫分类学二等奖。陕西省昆虫学会副理事长、陕西省动物学会常务理事。国际首次蝴蝶识别大赛竞赛委员会主席(2018)主讲:动物学,进化生物学,昆虫分类学等课程。
二、主要研究领域及兴趣
1.昆虫分类与进化在开展昆虫分类研究的基础上,综合应用几何形态测量学、生物信息学、地理信息系统等现代分类学新技术从表型-基因-环境三个方面解析生物多样性分布规律、物种形成机制等分类和进化科学问题。
2.进化基因组学 重要经济和药用动物功能的全基因组解析。
三、承担的科研项目
1.主持国家自然科学基金面上项目,基于密码子偏好性分析的直翅目昆虫线粒体基因演化驱动机制研究,2019.1.1-2022.12.31,31872273;
2.主持国家自然科学基金面上项目,雏蝗属昆虫翅形态结构演化及进化相关性研究,2014.1.1-2014.12.31,31372250;
3.主持国家自然科学基金面上项目,秦岭及邻近地区蝗虫的分布格局及其形成,2007.1.1-2009.12.31,30670250;
4.主持国家自然科学基金面上项目,中国斑腿蝗科支序生物地理学和性状地理演化研究, 2004.1.1-2006.12.31,30370170;
5.参与国家自然科学基金面上项目,大数据背景下的特征选择算法及其在结肠癌数据分析中的应用,2018.1.1-2021.12.31,61673251,2/7
6.参与国家自然科学基金面上项目,昆虫近缘种的形态演化、遗传分化规律及其与生境异质性相关性研究-以竹蝗属为例,2015.1.1-2017.12.31,31402006,2/7;
7.主持陕西省科技攻关重点项目,基于基因组学大数据的水蛭抗凝、溶栓活性成分筛选及开发利用,2018.1.1-2020.12.31,2018ZDXM-SF-079。
8.主持陕西省科技厅项目,陕西特有珍稀易危物种——秦巴北鲵的保护生物学研究,2013.1.1-2015.12.31,2013JC-04
9.主持陕西省科技厅项目,陕西药用动物分布规律研究及数据库建设,2016.1.1-2008.12.31,2005C114;
10.参与陕西省科技厅项目,北方山溪鲵的谱系地理学和保护生物学研究,2013.1.1-2015.12.31,2013JC-05,2/2;
11.参与陕西省科技厅项目,大鲵生殖及保护生物学研究,2008.1.1-2010.12.31,2007C114,3/6;
12.横向项目,秦岭关键濒危动物致濒机理及其种群扩繁技术的研究,2012,10-2014,10。
四、出版的著作
1.《秦岭昆虫志·十一卷·膜翅目》,2018,世界图书出版公司,参编
2.《陕西米仓山自然保护区综合考察报告》,2008,科学出版社,副主编。
五、代表性论文
1.Wang M-Z, Ali H,Xu YD,Xie , JY, Xu SQ(许升全)*. BiPSTP: sequence feature encoding method for identifying different RNA modifications with bidirectional position-specific trinucleotides propensities. Journal of biological chemistry, 2024;DOI10.1016/j.jbc.2024.107140.
2.Ge J-J, Ying H-F, Xu SQ(许升全), Huang HT. Mitochondrial genome phylogeny reveals the deep-time origin of Gomphomastacinae (Orthoptera: Eumastacidae) and its alpine genera in China. Journal of Systematics and Evolution. 2023;61(6):1047-1055.
3.Zhao L, Li X-D, Jiang T, ……,Xu SQ(许升全), Guan DL. The Chromosome-Level Genome of Hestina assimilis (Lepidoptera: Nymphalidae) Reveals the Evolution of Saprophagy-Related Genes in Brush-Footed Butterflies. International Journal of Molecular Sciences. 2023;24(3).
4.Lu JH, Guan DL,Xu SQ(许升全), Huang H. De Novo Assembly and Characterization of the Transcriptome of an Omnivorous Camel Cricket (Tachycines meditationis). International Journal of Molecular Sciences. 2023;24(4).
5.Qiu ST,Xu SQ(许升全), Huang HT. A synoptic review of Gomphomastacinae (Orthoptera: Eumastacoidea) from the Qinghai-Tibet plateau with a description of new species. Zootaxa. 2021;4903(2):296-300.
6.Sun K, Guan DL, Huang HT, Xu SQ(许升全). Genome Survey Sequencing of the Mole Cricket Gryllotalpa orientalis. Genes. 2023;14(2).
7.Wang M, Xie J, Grant PW,Xu SQ(许升全). PSP-PJMI: An innovative feature representation algorithm for identifying DNA N4-methylcytosine sites. Information Sciences. 2022;606:968-983.
8.Wang M, Xie J,Xu SQ(许升全). M6A-BiNP: predicting N6-methyladenosine sites based on bidirectional position-specific propensities of polynucleotides and pointwise joint mutual information. RNA Biology. 2021;18(12):2498-2512.
9.Zhao L, Wang H, Li P, Sun K, Guan DL,Xu SQ(许升全). Genome Size Estimation and Full-Length Transcriptome of Sphingonotus tsinlingensis: Genetic Background of a Drought-Adapted Grasshopper. Frontiers in Genetics. 2021;12.
10.Zhao L, Wang WQ,Xu SQ(许升全), Guan DL. The Comparison of Gut Bacteria Communities and the Functions Among the Sympatric Grasshopper Species From the Loess Plateau. Frontiers in Microbiology. 2022;13.
11.Dan Z, Duan L, Chen Z, Guan D,Xu SQ(许升全). Mitogenomes of Three Satyrid Butterfly Species (Nymphalidae: Lepidoptera) and Reconstructed Phylogeny of Satyrinae. Diversity-Basel. 2021;13(10).
12.Dan ZC, Guan DL, Jiang T, Wang H, Zhao L,Xu SQ(许升全). Evolution of Gene Arrangements in the Mitogenomes of Ensifera and Characterizatio n of the Complete Mitogenome of Schizodactylus jimo. International Journal of Molecular Sciences. 2022;23(20).
13.Bai Y, Dong JJ, Guan DL, Xie JY,Xu SQ(许升全). Geographic variation in wing size and shape of the grasshopper Trilophidia annulata (Orthoptera: Oedipodidae): morphological trait variations follow an ecogeographical rule. Scientific Reports. 2016;6.
14.Dong JJ, Chen ZN, Wang WQ, Guan DL,Xu SQ(许升全), Robillard T. A new species of the genus Hilethera Uvarov, 1923 (Orthoptera: Acrididae: Oedipodinae) from China and its complete mitochondrial genome. Zootaxa. 2019;4564(2):514-530.
15.Dong JJ, Kergoat GJ, Vicente N, Rahmadi C,Xu SQ(许升全), Robillard T. Biogeographic patterns and diversification dynamics of the genus Cardiodactylus Saussure (Orthoptera, Grylloidea, Eneopterinae) in Southeast Asia. Molecular Phylogenetics and Evolution. 2018;129:1-14.
16.Ge JJ, Agrippine YFJ,Xu SQ(许升全), Huang HT. Description of three new species of Gomphomastacinae (Orthoptera: Eumastacoidea) from the east of Qinghai-Tibet plateau, China. Zootaxa. 2021;5068(3):419-427.
17.Guan DL, Hao XQ, Mi D, ……,Xu SQ(许升全). Draft Genome of a Blister Beetle Mylabris aulica. Frontiers in Genetics. 2020;10.
18.Guan DL, Ma LB, Khan MS, Zhang XX,Xu SQ(许升全), Xie JY. Analysis of codon usage patterns in Hirudinaria manillensis reveals a preference for GC-ending codons caused by dominant selection constraints. BMC Genomics. 2018;19.
19.Guan DL, Qian ZQ, Ma LB, Bai Y,Xu SQ(许升全). Different mitogenomic codon usage patterns between damselflies and dragonflies and nine complete mitogenomes for odonates. Scientific Reports. 2019;9.
20.Guan DL, Yang J, Liu YK, ……, Xu SQ(许升全), Qiu Q. Draft Genome of the Asian Buffalo Leech Hirudinaria manillensis. Frontiers in Genetics. 2020;10.
21.Guan D-L, Zhao L, Li Y, Xing LX, Huang H,Xu SQ(许升全). Genome assembly of Luehdorfia taibai, an endangered butterfly endemic to Qinling Moutains in China with extremely small populations. Frontiers in Ecology and Evolution. 2022;10.
22.Khan MS, Guan DL, Kvist S, Ma L-B, Xie JY,Xu SQ(许升全). Transcriptomics and differential gene expression in Whitmania pigra (Annelida: Clitellata: Hirudinida: Hirudinidae): Contrasting feeding and fasting modes. Ecology and Evolution. 2019;9(8):4706-4719.
23.Khan MS, Guan DL, Ma LB, Xie JY,Xu SQ(许升全). Analysis of synonymous codon usage pattern of genes in unique non-blood-sucking leech Whitmania pigra. Journal of Cellular Biochemistry. 2019;120(6): 9850-9858.
24.Xie JY, Kong WX, Lu YY, Grant PW,Xu SQ(许升全). KSRFB-net: detecting and identifying butterflies in ecological images based on human visual mechanism. International Journal of Machine Learning and Cybernetics. 2022;13(10):3143-3158.
25.Xie JY, Lu YY, Kong WX, Xu SQ(许升全). Butterfly Species Identification from Natural Environment Based on Improved RetinaNet. Journal of Computer Research and Development. 2021;58(8):1686-1704.
26.Xie JY, Lu YY, Wu ZZ,Xu SQ(许升全), Grant PW. Investigations of butterfly species identification from images in natural environments. International Journal of Machine Learning and Cybernetics. 2021;12(8):2431-2442.
27.谢娟英,王明钊,许升全.面向甲基化修饰位点预测的DNA/RNA序列特征编码算法研究进展.中国科学:生命科学,2023;53(6):841-875.
28.Xie JY, Wang MZ,Xu SQ(许升全), Huang Z, Grant PW. The Unsupervised Feature Selection Algorithms Based on Standard Deviation and Cosine Similarity for Genomic Data Analysis. Frontiers in Genetics. 2021;12.
29.Yetchom-Fondjo JA, Kekeunou S, Kenne M, Missoup AD,Xu SQ(许升全). Diversity, abundance and distribution of grasshopper species (Orthoptera: Acrididea) in three different types of vegetation with different levels of anthropogenic disturbances in the Littoral Region of Cameroon. Journal of Insect Biodiversity. 2020;14(1):16-33.
六、获奖情况
1.《稻蝗的研究与防治》,2003年获得陕西省科学技术进步奖二等奖,第二完成人;
2.《宁夏草原蝗虫群落特征研究及优势种防治研究》,1998年获得宁夏回族自治区科学技术进步奖二等奖,第5完成人。